Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919445.1_cds_XP_016468646.1_61265
CDS Infomation

[gene=LOC107791148] [db_xref=GeneID:107791148] [protein=protein CHUP1, chloroplastic-like] [protein_id=XP_016468646.1] [location=complement(join(91920..92402,94213..95052))] [gbkey=CDS]
Sequence

ATGGAAAGCAATAGCACAAAGGTGGAAATGATAAAGCCAGTATTTCTCAAAGCTGGAATT
CCTATAGCCATAACTTTGGCTGGATATATTATTGCCAAAATCACAACAAAAAGAAGCTCA
ATTTTGACACATTCAACAAATCAAGAAAATTCTCAAGAAATTATAACTGATCAACATGAT
ATCTCAAGAGATGAAGTTGGCCTTAATCAAAATCTTGATTATTCAGAATATGAAGATGAT
CATTCTTCTACACATACCATTTACAAAGATTCAGCAGAAAGTTTTCATTTTCAAGATAAA
TGCAAATTTGAAGAAGATTTGCTAAGCTTAAGAAGGCGAACGGATGATATTGAAGAGAGG
GAACATCAATTAGAGGCCAGGTTTCAACAATATACTCACTTAAAAGATCAAGAAATTGCA
CTTATGGATATGCAAAACAAGTTGTTATTAGAGATCAATAAAATTGAGTTCTTTGATAAG
GAAATAACACTAATGGAGGGAGAAAACCAAAGATTTCAGAATATGGTAATTGAATATTTG
AGAATTATGGAACTTCTTGACTTGTCACAATCAGAAAATAAATTGCTTCACAAAAAGGTT
AAGAAGCTTTTGAAGAAGATCAAAGAACATTCAATTGTTTTGAAGGAGCAGAACTTTCAA
CTTGAAGCTAAAGAAACAGAAATTTCAAGAAATCAACAAGGGCTAGAAATGAAAGATCAT
ATTATCAAGAAAATGGAATTACATATTGAAGAGTTGAAAATGGCTATTGAGCAATTGCAA
GAGGAGAAGACTGGACTACATAGAAAGCTAGAAGTGGGAAAGAATTCAAATCCATCCAAG
AATGATGTGGAAGTGGTAACAGTAGAAGATTACAAAGAATTGGCAAATGAACTTGAGCAA
CTGCAGAAGGATAAAGCTACTGAAGACAAAGAACTAATATACTTAAGGTGGTGCAATGCA
TGTTTAAGGCATGAATTAATGAGGAGGAATCAAGAACAAATGGAACAAGAGAAAAACCAT
GATCAAGAATTGAATTTGGGAGAAGAAAATACAGAAATTGTAACAGAATTTGTACCAAAA
CATGAATTAATTATGAGGAGGAGTTCATCAATGGGACACAATGAATCTTGCTTAAGTTCC
CCTATTAATGAAGGCCATTCAAATGATCATTCCAAAAGGAGAAAATTAATACAGAAGTTC
AAGAAATGGGTAGAGGGAAGTGATAAAATGAAACATGAAACCAATTGCTTTAAAAGGCAG
ACTGTTTCTGATTGTACTGAGGAATTAATGATTCCTGCTAGAAAATCATGTTCTAGTGCC
TAA

Peptide Sequence

PEP ID

XP_016468646.1
PEP Infomation

PREDICTED: protein CHUP1, chloroplastic-like [Nicotiana tabacum]
Sequence

MESNSTKVEMIKPVFLKAGIPIAITLAGYIIAKITTKRSSILTHSTNQENSQEIITDQHD
ISRDEVGLNQNLDYSEYEDDHSSTHTIYKDSAESFHFQDKCKFEEDLLSLRRRTDDIEER
EHQLEARFQQYTHLKDQEIALMDMQNKLLLEINKIEFFDKEITLMEGENQRFQNMVIEYL
RIMELLDLSQSENKLLHKKVKKLLKKIKEHSIVLKEQNFQLEAKETEISRNQQGLEMKDH
IIKKMELHIEELKMAIEQLQEEKTGLHRKLEVGKNSNPSKNDVEVVTVEDYKELANELEQ
LQKDKATEDKELIYLRWCNACLRHELMRRNQEQMEQEKNHDQELNLGEENTEIVTEFVPK
HELIMRRSSSMGHNESCLSSPINEGHSNDHSKRRKLIQKFKKWVEGSDKMKHETNCFKRQ
TVSDCTEELMIPARKSCSSA

Transcript Sequence

Gene sequence data has not been registered.